8. API Reference

8.1. Pipeline Elements

Contents:

• 8.1.1. Data Grabbers
  • BaseDataGrabber
  • DataladAOMICID1000
  • DataladAOMICPIOP1
  • DataladAOMICPIOP2
  • DataladDataGrabber
  • DataladHCP1200
  • HCP1200
  • MultipleDataGrabber
  • PatternDataGrabber
  • PatternDataladDataGrabber
• 8.1.2. DataReaders
  • DefaultDataReader
• 8.1.3. Pre-processing
  • BasePreprocessor
  • fMRIPrepConfoundRemover
• 8.1.4. Markers
  • AmplitudeLowFrequencyFluctuationParcels
  • AmplitudeLowFrequencyFluctuationSpheres
  • BaseMarker
  • CrossParcellationFC
  • FunctionalConnectivityParcels
  • FunctionalConnectivitySpheres
  • MarkerCollection
  • ParcelAggregation
  • RSSETSMarker
  • ReHoParcels
  • ReHoSpheres
  • SphereAggregation
• 8.1.5. Storage
  • BaseFeatureStorage
  • PandasBaseFeatureStorage
  • SQLiteFeatureStorage

8.2. Utilities

Contents:

• 8.2.1. Parcellations
  • list_parcellations()
  • load_parcellation()
  • register_parcellation()
• 8.2.2. Coordinates
  • list_coordinates()
  • load_coordinates()
  • register_coordinates()
• 8.2.3. Masks
  • list_masks()
  • load_mask()
  • register_mask()
• 8.2.4. Stats
  • get_aggfunc_by_name()
  • winsorized_mean()
• 8.2.5. Pipeline
  • PipelineStepMixin
  • UpdateMetaMixin
• 8.2.6. Registry
  • build()
  • get_class()
  • get_step_names()
  • register()
• 8.2.7. API Functions
  • Main API functions
  • Decorators
• 8.2.8. Utils
  • configure_logging()
  • make_executable()
  • raise_error()
  • warn_with_log()
• 8.2.9. Testing
  • OasisVBMTestingDatagrabber
  • PartlyCloudyTestingDataGrabber
  • SPMAuditoryTestingDatagrabber

8.3. Configs

Contents:

• 8.3.1. Configs
  • Juseless
    • JuselessDataladAOMICID1000VBM
    • JuselessDataladCamCANVBM
    • JuselessDataladIXIVBM
    • JuselessDataladUKBVBM
    • JuselessUCLA